Discover insights from thousands of peer-reviewed papers on microbial electrochemical systems
Ailing Zhao, Jia-Zheng Sun, Yipin Liu
Frontiers in Cellular and Infection Microbiology · 2023
Bacterial biofilms are complex microbial communities encased in extracellular polymeric substances. Their formation is a multi-step process. Biofilms are a significant problem in treating bacterial infections and are one of the main reasons for the persistence of infections. They can exhibit increased resistance to classical antibiotics and cause disease through device-related and non-device (tissue) -associated infections, posing a severe threat to global health issues. Therefore, early detection and search for new and alternative treatments are essential for treating and suppressing biofilm-associated infections. In this paper, we systematically reviewed the formation of bacterial biofilms, associated infections, detection methods, and potential treatment strategies, aiming to provide researchers with the latest progress in the detection and treatment of bacterial biofilms.
L. Stadler, Jeseth Delgado Vela, Sunit Jain et al.
Microbial Biotechnology · 2017
In addition to removing organics and other nutrients, the microorganisms in wastewater treatment plants (WWTPs) biotransform many pharmaceuticals present in wastewater. The objective of this study was to examine the relationship between pharmaceutical biotransformation and biodiversity in WWTP bioreactor microbial communities and identify taxa and functional genes that were strongly associated with biotransformation. Dilution‐to‐extinction of an activated sludge microbial community was performed to establish cultures with a gradient of microbial biodiversity. Batch experiments were performed using the dilution cultures to determine biotransformation extents of several environmentally relevant pharmaceuticals. With this approach, because the communities were all established from the same original community, and using sequencing of the 16S rRNA and metatranscriptome, we identified candidate taxa and genes whose activity and transcript abundances associated with the extent of individual pharmaceutical biotransformation and were lost across the biodiversity gradient. Metabolic genes such as dehydrogenases, amidases and monooxygenases were significantly associated with pharmaceutical biotransformation, and five genera were identified whose activity significantly associated with pharmaceutical biotransformation. Understanding how biotransformation relates to biodiversity will inform the design of biological WWTPs for enhanced removal of chemicals that negatively impact environmental health.
Dadrasnia Arezoo, Usman Mohammed Maikudi, Lim Kang Tzin et al.
Environmental Pollution and Protection · 2017
Generation of wastewater is just unavoidable but its discharge into the environment is of great concern. Wastewater mainly comprised of any unwanted waste that could pollute our water system including sewage sludge, wastewater from domestic, industrial, dairy, fish canning and oil and gas industry. Since the early 1990s, microbial treatment processes have gained increasing attention due to its facility and high efficiency compared to conventional techniques. This paper focuses on the essential mechanisms involved in different microbial treatment techniques and special attention on the most recent challenges and developments will be highlighted in this review.
Tang Liu, Shufeng Liu, Maosheng Zheng et al.
PLOS ONE · 2016
Microbial communities of activated sludge (AS) play a key role in the performance of wastewater treatment processes. However, seasonal variability of microbial population in varying AS-based processes has been poorly correlated with operation of full-scale wastewater treatment systems (WWTSs). In this paper, significant seasonal variability of AS microbial communities in eight WWTSs located in the city of Guangzhou were revealed in terms of 16S rRNA-based Miseq sequencing. Furthermore, variation redundancy analysis (RDA) demonstrated that the microbial community compositions closely correlated with WWTS operation parameters such as temperature, BOD, NH4+-N and TN. Consequently, support vector regression models which reasonably predicted effluent BOD, SS and TN in WWTSs were established based on microbial community compositions. This work provided an alternative tool for rapid assessment on performance of full-scale wastewater treatment plants.
Ken Meerbergen, Maarten Van Geel, M. Waud et al.
MicrobiologyOpen · 2016
It is assumed that microbial communities involved in the biological treatment of different wastewaters having a different chemical composition harbor different microbial populations which are specifically adapted to the environmental stresses encountered in these systems. Yet, little is known about the composition of these microbial communities. Therefore, the aim of this study was to assess the microbial community composition over two seasons (winter and summer) in activated sludge from well‐operating textile wastewater treatment plants (WWTPs) in comparison with municipal WWTPs, and to explain observed differences by environmental variables. 454‐pyrosequencing generated 160 archaeal and 1645 bacterial species‐level Operational Taxonomic Units (OTUs), with lower observed richness in activated sludge from textile WWTPs compared to municipal WWTPs. The bacterial phyla Planctomycetes, Chloroflexi, Chlorobi, and Acidobacteria were more abundant in activated sludge samples from textile WWTPs, together with archaeal members of Thaumarchaeota. Nonmetric multidimensional scaling analysis of the microbial communities showed that microbial communities from textile and municipal WWTPs were significantly different, with a seasonal effect on archaea. Nitrifying and denitrifying bacteria as well as phosphate‐accumulation bacteria were more abundant in municipal WWTPs, while sulfate‐reducing bacteria were almost only detected in textile WWTPs. Additionally, microbial communities from textile WWTPs were more dissimilar than those of municipal WWTPs, possibly due to a wider diversity in environmental stresses to which microbial communities in textile WWTPs are subjected to. High salinity, high organic loads, and a higher water temperature were important potential variables driving the microbial community composition in textile WWTPs. This study provides a general view on the composition of microbial communities in activated sludge of textile WWTPs, and may provide novel insights for identifying key players performing important functions in the purification of textile wastewaters.
S. Bizzarro, M. Laine, M. Buijs et al.
Scientific Reports · 2016
Antibiotics are often used in the treatment of chronic periodontitis, which is a major cause of tooth loss. However, evidence in favour of a microbial indication for the prescription of antibiotics is lacking, which may increase the risk of the possible indiscriminate use of antibiotics and consequent, microbial resistance. Here, using an open-ended technique, we report the changes in the subgingival microbiome up to one year post-treatment of patients treated with basic periodontal therapy with or without antibiotics. Antibiotics resulted in a greater influence on the microbiome 3 months after therapy, but this difference disappeared at 6 months. Greater microbial diversity, specific taxa and certain microbial co-occurrences at baseline and not the use of antibiotics predicted better clinical treatment outcomes. Our results demonstrate the predictive value of specific subgingival bacterial profiles for the decision to prescribe antibiotics in the treatment of periodontitis, but they also indicate the need for alternative therapies based on ecological approaches.
Y. Zou, A. Jiang
Food Science and Technology · 2016
Effect of ultrasound treatment on carrot juice was investigated through measuring pH, electrical conductivity, viscosity, visual color, total soluble solids, total sugars, total carotenoids, ascorbic acid contents and microbial load. No significant effect (p>0.05) of ultrasound treatment on pH of carrot juice was observed. Electrical conductivity, viscosity and color values gradually increased (p<0.05) with treatment time increase. Total soluble solids, total sugars, total carotenoids and ascorbic acid contents of carrot juice were significantly improved (p<0.05) due to ultrasound treatment. Moreover, significant decrease (p<0.05) in microbial load of sonicated carrot juice was observed. Results from present study suggested that ultrasound treatment could improve quality and safety of carrot juice.
N. Shchegolkova, G. Krasnov, A. A. Belova et al.
Frontiers in Microbiology · 2016
Activated sludge (AS) plays a crucial role in the treatment of domestic and industrial wastewater. AS is a biocenosis of microorganisms capable of degrading various pollutants, including organic compounds, toxicants, and xenobiotics. We performed 16S rRNA gene sequencing of AS and incoming sewage in three wastewater treatment plants (WWTPs) responsible for processing sewage with different origins: municipal wastewater, slaughterhouse wastewater, and refinery sewage. In contrast to incoming wastewater, the taxonomic structure of AS biocenosis was found to become stable in time, and each WWTP demonstrated a unique taxonomic pattern. Most pathogenic microorganisms (Streptococcus, Trichococcus, etc.), which are abundantly represented in incoming sewage, were significantly decreased in AS of all WWTPs, except for the slaughterhouse wastewater. Additional load of bioreactors with influent rich in petroleum products and organic matter was associated with the increase of bacteria responsible for AS bulking and foaming. Here, we present a novel approach enabling the prediction of the metabolic potential of bacterial communities based on their taxonomic structures and MetaCyc database data. We developed a software application, XeDetect, to implement this approach. Using XeDetect, we found that the metabolic potential of the three bacterial communities clearly reflected the substrate composition. We revealed that the microorganisms responsible for AS bulking and foaming (most abundant in AS of slaughterhouse wastewater) played a leading role in the degradation of substrates such as fatty acids, amino acids, and other bioorganic compounds. Moreover, we discovered that the chemical, rather than the bacterial composition of the incoming wastewater was the main factor in AS structure formation. XeDetect (freely available: https://sourceforge.net/projects/xedetect) represents a novel powerful tool for the analysis of the metabolic capacity of bacterial communities. The tool will help to optimize bioreactor performance and avoid some most common technical problems.
Y. Salama, M. Chennaoui, A. Sylla et al.
Desalination and Water Treatment · 2016
AbstractA review concerning the definition, extraction, characterization, production, and functions of extracellular polymeric substances (EPS) of microbial aggregates in biological wastewater treatment reactors is given in this paper. EPS are a complex high-molecular-weight mixture of polymers excreted by microorganisms, produced from cell lysis and adsorbed organic matter from wastewater. The EPS fill and form the space between the biofilm constituents, e.g. prokaryotic and eukaryotic microorganisms which inhabit the aggregates. It seems that the EPS matrix may serve as a multipurpose functional element of microbial communities, including adhesion, structure, protection, recognition, and physiology. Due to the metabolic activity of the cells, gradients develop and create different habitats within small distances, allowing a wide variety of organisms to settle and grow in the aggregate. As many of these organisms produce their specific EPS, it is not surprising that an extremely wide variety of microbial...
Rajbir Singh, Sandeep Chandrashekharappa, S. R. Bodduluri et al.
Nature Communications · 2019
The importance of gut microbiota in human health and pathophysiology is undisputable. Despite the abundance of metagenomics data, the functional dynamics of gut microbiota in human health and disease remain elusive. Urolithin A (UroA), a major microbial metabolite derived from polyphenolics of berries and pomegranate fruits displays anti-inflammatory, anti-oxidative, and anti-ageing activities. Here, we show that UroA and its potent synthetic analogue (UAS03) significantly enhance gut barrier function and inhibit unwarranted inflammation. We demonstrate that UroA and UAS03 exert their barrier functions through activation of aryl hydrocarbon receptor (AhR)- nuclear factor erythroid 2–related factor 2 (Nrf2)-dependent pathways to upregulate epithelial tight junction proteins. Importantly, treatment with these compounds attenuated colitis in pre-clinical models by remedying barrier dysfunction in addition to anti-inflammatory activities. Cumulatively, the results highlight how microbial metabolites provide two-pronged beneficial activities at gut epithelium by enhancing barrier functions and reducing inflammation to protect from colonic diseases. Urolithins are microbial metabolites derived from food polyphenols. Here, Singh et al. show that urolithin A and a synthetic analogue enhance gut barrier function via Nrf2-dependent pathways and mitigate inflammation and colitis in mice, highlighting a potential application for inflammatory bowel diseases.
Jianhua Guo, Yongzhen Peng, B. Ni et al.
Microbial Cell Factories · 2015
BackgroundAnaerobic digestion has been widely applied to treat the waste activated sludge from biological wastewater treatment and produce methane for biofuel, which has been one of the most efficient solutions to both energy crisis and environmental pollution challenges. Anaerobic digestion sludge contains highly complex microbial communities, which play crucial roles in sludge treatment. However, traditional approaches based on 16S rRNA amplification or fluorescent in situ hybridization cannot completely reveal the whole microbial community structure due to the extremely high complexity of the involved communities. In this sense, the next-generation high-throughput sequencing provides a powerful tool for dissecting microbial community structure and methane-producing pathways in anaerobic digestion.ResultsIn this work, the metagenomic sequencing was used to characterize microbial community structure of the anaerobic digestion sludge from a full-scale municipal wastewater treatment plant. Over 3.0 gigabases of metagenomic sequence data were generated with the Illumina HiSeq 2000 platform. Taxonomic analysis by MG-RAST server indicated that overall bacteria were dominant (~93%) whereas a considerable abundance of archaea (~6%) were also detected in the anaerobic digestion sludge. The most abundant bacterial populations were found to be Proteobacteria, Firmicutes, Bacteroidetes, and Actinobacteria. Key microorganisms and related pathways involved in methanogenesis were further revealed. The dominant proliferation of Methanosaeta and Methanosarcina, together with the functional affiliation of enzymes-encoding genes (acetate kinase (AckA), phosphate acetyltransferase (PTA), and acetyl-CoA synthetase (ACSS)), suggested that the acetoclastic methanogenesis is the dominant methanogenesis pathway in the full-scale anaerobic digester.ConclusionsIn short, the metagenomic sequencing study of this work successfully dissected the detail microbial community structure and the dominated methane-producing pathways of a full-scale anaerobic digester. The knowledge garnered would facilitate to develop more efficient full-scale anaerobic digestion systems to achieve high-rate waste sludge treatment and methane production.
F. Ju, Frankie T. K. Lau, Tong Zhang
Environmental Science & Technology · 2017
Understanding the influences of biotic and abiotic factors on microbial community structure and methanogenesis are important for its engineering and ecological significance. In this study, four biogas digesters were supplied with the same inoculum and feeding sludge but operated at different sludge retention time (7 to 16 days) and organic loading rates for 90 days to determine the relative influence of biotic and environmental factors on the microbial community assembly and methanogenic performance. Despite different operational parameters, all digester communities were dominated by Bacteroidales, Clostridiales, and Thermotogales and followed the same trend of population dynamics over time. Network and multivariate analyses suggest that deterministic factors, including microbial competition (involving Bacteroidales spp.), niche differentiation (e.g., within Clostridiales spp.), and periodic microbial immigration (from feed sludge), are the key drivers of microbial community assembly and dynamics. A yet-to-be-cultured phylotype of Bacteroidales (GenBank ID: GU389558.1 ) is implicated as a strong competitor for carbohydrates. Moreover, biogas-producing rate and methane content were significantly related with the abundances of functional populations rather than any operational or physicochemical parameter, revealing microbiological mediation of methanogenesis. Combined, this study enriches our understandings of biological and environmental drivers of microbial community assembly and performance in anaerobic digesters.
Bo Zhang, Xiang-yang Xu, Liang Zhu
Scientific Reports · 2017
To better understand the relationship between the environmental variables and microbial communities of activated sludge, we took winter samples from different biological treatment units (anaerobic, oxic, etc) from the WWTP’s of a number of Chinese cities. Differences in influent organic components and activated sludge microbial communities were identified by gas chromatography-mass spectrometry and high-throughput sequencing technology, respectively. Liquid nitrogen grinding pretreatment of samples was found to aid in the obtaining of a more bio-diversified sample. Influent type and dissolved oxygen concentration influenced the activated sludge microbial community structure. Nitrospira, Caldilineaceae and Anaerolineaceae were highly related to domestic wastewater treatment systems, whereas Thauera was the most abundant putative refractory aromatic hydrocarbon decomposer found in industrial wastewater treatment systems. Within the influent composition, we speculate that Thauera, Macellibacteroides and Desulfomicrobium are the key functional genera of the anaerobic environment of the textile dyeing industry wastewater treatment systems, whilst Thauera and Thiobacillus are key functional microbes in fine chemical wastewater treatment systems.
Heyang Yuan, Yang Hou, I. Abu-Reesh et al.
Materials Horizons · 2016
Microbial fuel cells (MFCs) as an energy-efficient wastewater treatment technology have attracted increasing interest in the past decade. Cathode catalysts for the oxygen reduction reaction (ORR) present a major challenge for the practical applications of MFCs. An ideal cathode catalyst should be scalable, durable, and cost-effective. A variety of non-precious metal catalysts have been developed for MFC applications, including carbon-based catalysts, metal-based catalysts, metal–carbon hybrids, metal–nitrogen–carbon complexes, and biocatalysts. This paper comprehensively reviews these materials with emphasis on their synthesis, performance, durability, and cost. It is anticipated that insights offered in this review could facilitate the development of ORR catalysts for MFC applications towards energy-efficient wastewater treatment.
Liguan Li, A. Dechesne, Zhiming He et al.
Environmental Science & Technology Letters · 2018
Wastewater treatment plants (WWTPs) have been suggested as reservoirs and sources of antibiotic resistance genes (ARGs) in the environment. In a WWTP ecosystem, human enteric and environmental bacteria are mixed and exposed to pharmaceutical residues, potentially favoring genetic exchange and thus ARG transmission. However, the contribution of microbial communities in WWTPs to ARG dissemination remains poorly understood. Here, we examined for the first time plasmid permissiveness of an activated sludge microbial community by utilizing an established fluorescent bioreporter system. The activated sludge microbial community was challenged in standardized filter matings with one of three multidrug resistance plasmids (pKJK5, pB10, and RP4) harbored by Escherichia coli or Pseudomonas putida. Different donor–plasmid combinations had distinct transfer frequencies, ranging from 3 to 50 conjugation events per 100000 cells of the WWTP microbial community. In addition, transfer was observed to a broad phylogenetic r...
Kunichika Nakamiya, S. Hashimoto, Hiroyasu Ito et al.
Journal of Bioscience and Bioengineering · 2005
In this study, we investigated the use of microbes to degrade and remove bis (2-ethylhexyl) phthalate (DEHP), a common plasticizer and a suspected endocrine disruptor, exuding from polyvinyl chloride. Four species of bacteria that utilize DEHP as their sole carbon source were isolated from garden soil, one of which, strain NK0301, was markedly more efficient than the others in degrading DEHP and was chosen for further studies. Strain NK0301 was a coryneform bacterium (1.5x1.0 microm) identified as Mycobacterium sp. from its 16S rDNA sequencing homology. It readily degraded DEHP to two major products determined by gas chromatography/mass spectrometry to be 2-ethylhexanol and 1,2-benzenedicarboxylic acid. Other phthalate esters, suspected of being endocrine disruptors, were also tested and all except two could be utilized by strain NK0301 as their sole source of carbon. When strain NK0301 was cultivated on polyvinyl chloride sheets containing DEHP as the plasticizer, it removed up to 90% of DEHP in 3 d. Following this treatment, the polyvinyl chloride sheets did not exude DEHP to artificial saliva.
Raina M. Miller, George M. Singer, J. D. Rosen et al.
Environmental Science & Technology · 1988
Using the radiolabeled model pollutants 2,4-dichlorophenol (DCP) and 2,4,5-trichlorophenol (TCP) the authors demonstrated that the brief UV (300-nm) photolysis greatly facilitates the removal of the two chlorophenols from sewage through accelerated mineralization and binding of polar products. The addition of 0.1 M H/sub 2/O/sub 2/ strongly accelerated the photolysis process resulting in the half-lives of 1.68 and 0.87 min for DCP and TCP, respectively. In natural sunlight, half-lives of the chlorophenols were less than 1 day when H/sub 2/O/sub 2/ was present. During 4 days of incubation in activated sewage sludge, only 3% of unphotolyzed DCP and 1% of unphotolyzed TCP were mineralized. Mineralization rose to 79 and 59%, respectively, after photolysis in the presence of H/sub 2/O/sub 2/. Photolysis without H/sub 2/O/sub 2/ resulted in removal of chlorophenols from solution chiefly by binding. Increased mineralization and binding were observed also upon incubation of photolyzed chlorophenols in soil. Disruption of carbon-halogen bonds by brief photolysis followed by traditional biological effluent treatment offers an alternative to activated charcoal treatment for removal of xenobiotics from industrial effluents.
Maik Luu, Zeno Riester, Adrian Baldrich et al.
Nature Communications · 2021
Emerging data demonstrate that the activity of immune cells can be modulated by microbial molecules. Here, we show that the short-chain fatty acids (SCFAs) pentanoate and butyrate enhance the anti-tumor activity of cytotoxic T lymphocytes (CTLs) and chimeric antigen receptor (CAR) T cells through metabolic and epigenetic reprograming. We show that in vitro treatment of CTLs and CAR T cells with pentanoate and butyrate increases the function of mTOR as a central cellular metabolic sensor, and inhibits class I histone deacetylase activity. This reprogramming results in elevated production of effector molecules such as CD25, IFN-γ and TNF-α, and significantly enhances the anti-tumor activity of antigen-specific CTLs and ROR1-targeting CAR T cells in syngeneic murine melanoma and pancreatic cancer models. Our data shed light onto microbial molecules that may be used for enhancing cellular anti-tumor immunity. Collectively, we identify pentanoate and butyrate as two SCFAs with therapeutic utility in the context of cellular cancer immunotherapy. The activity of immune cells can be regulated by the microbiome. Here, the authors show that the fatty acids pentanoate and butyrate—normally released by the microbiome—increase the anti-tumour activity of cytotoxic T lymphocytes and chimeric antigen receptor T cells through metabolic and epigenetic reprogramming.
I. Chang, J. Im, G. Cho
Sustainability · 2016
Soil treatment and improvement is commonly performed in the field of geotechnical engineering. Methods and materials to achieve this such as soil stabilization and mixing with cementitious binders have been utilized in engineered soil applications since the beginning of human civilization. Demand for environment-friendly and sustainable alternatives is currently rising. Since cement, the most commonly applied and effective soil treatment material, is responsible for heavy greenhouse gas emissions, alternatives such as geosynthetics, chemical polymers, geopolymers, microbial induction, and biopolymers are being actively studied. This study provides an overall review of the recent applications of biopolymers in geotechnical engineering. Biopolymers are microbially induced polymers that are high-tensile, innocuous, and eco-friendly. Soil–biopolymer interactions and related soil strengthening mechanisms are discussed in the context of recent experimental and microscopic studies. In addition, the economic feasibility of biopolymer implementation in the field is analyzed in comparison to ordinary cement, from environmental perspectives. Findings from this study demonstrate that biopolymers have strong potential to replace cement as a soil treatment material within the context of environment-friendly construction and development. Moreover, continuing research is suggested to ensure performance in terms of practical implementation, reliability, and durability of in situ biopolymer applications for geotechnical engineering purposes.
D. Speth, Michiel H. in ‘t Zandt, Simon Guerrero-Cruz et al.
Nature Communications · 2016
Partial-nitritation anammox (PNA) is a novel wastewater treatment procedure for energy-efficient ammonium removal. Here we use genome-resolved metagenomics to build a genome-based ecological model of the microbial community in a full-scale PNA reactor. Sludge from the bioreactor examined here is used to seed reactors in wastewater treatment plants around the world; however, the role of most of its microbial community in ammonium removal remains unknown. Our analysis yielded 23 near-complete draft genomes that together represent the majority of the microbial community. We assign these genomes to distinct anaerobic and aerobic microbial communities. In the aerobic community, nitrifying organisms and heterotrophs predominate. In the anaerobic community, widespread potential for partial denitrification suggests a nitrite loop increases treatment efficiency. Of our genomes, 19 have no previously cultivated or sequenced close relatives and six belong to bacterial phyla without any cultivated members, including the most complete Omnitrophica (formerly OP3) genome to date. ANaerobic AMMonium OXidation (ANAMMOX) combined with partial nitritation has been adopted for removal of ammonium from wastewater. Here, Speth et al. describe the bacterial metagenome of a partial-nitritation/anammox (PNA) reactor, and provide 23 draft genomes, 19 of which were previously uncharacterized/sequenced/cultivated.
M. Alam, A. Fakhru’l-Razi, A. H. Molla
Journal of Environmental Engineering and Science · 2003
The evaluation of cheap carbon sources (co-substrate) and process conditions for microbial treatment of domestic wastewater sludge (DWS) was investigated using a liquid state bioconversion (LSB) laboratory scale process. Six cheap carbon sources were used: wheat flour (WF), rice flour (RF), corn flour (CF), sago starch (SS), cassava starch (CS), and commercial sugar (S). Process conditions such as co-substrate(s) concentration, temperature, initial pH, and inoculum size were optimized in terms of dry filter cake (DFC) production, removal of total suspended solids (TSS), turbidity (optical density against distilled water, 660 nm), and chemical oxygen demand (COD) in supernatant. The results obtained indicated that sludge containing wheat flour as a carbon source was a better co-substrate for microbial growth, with significant utilization for minimizing the dissolved and suspended materials in sludge. The optimized parameters for fungal treatment of DWS obtained were 1.52% (w/w) of WF concentration, temper...
N. Vaziri, Ying-yong Zhao, M. Pahl
Nephrology Dialysis Transplantation · 2016
Chronic kidney disease (CKD) results in systemic inflammation and oxidative stress which play a central role in CKD progression and its adverse consequences. Although many of the causes and consequences of oxidative stress and inflammation in CKD have been extensively explored, little attention had been paid to the intestine and its microbial flora as a potential source of these problems. Our recent studies have revealed significant disruption of the colonic, ileal, jejunal and gastric epithelial tight junction in different models of CKD in rats. Moreover, the disruption of the epithelial barrier structure and function found in uremic animals was replicated in cultured human colonocytes exposed to uremic human plasma in vitro We have further found significant changes in the composition and function of colonic bacterial flora in humans and animals with advanced CKD. Together, uremia-induced impairment of the intestinal epithelial barrier structure and function and changes in composition of the gut microbiome contribute to the systemic inflammation and uremic toxicity by accommodating the translocation of endotoxin, microbial fragments and other noxious luminal products in the circulation. In addition, colonic bacteria are the main source of several well-known pro-inflammatory uremic toxins such as indoxyl sulfate, p-cresol sulfate, trimethylamine-N-oxide and many as-yet unidentified retained compounds in end-stage renal disease patients. This review is intended to provide an overview of the effects of CKD on the gut microbiome and intestinal epithelial barrier structure and their role in the pathogenesis of systemic inflammation and uremic toxicity. In addition, potential interventions aimed at mitigating these abnormalities are briefly discussed.
Y. Nakamura, Masakazu Daidai, F. Kobayashi
Water Science and Technology · 2004
Treatment methods comprising ozonolysis and microbial treatment of lignin discharged from the pulp manufacture industries were investigated by using a sulfite pulp wastewater and a lignin model compound, i.e. sodium lignosulfonate. Dynamic behaviors for the formations of intermediate derivatives such as muconic acid, maleic acid, and oxalic acid produced from the ozonolysis of sulfite pulp wastewater were observed from data of UV absorption at 280 nm by a spectrophotometer and at 210 nm by high performance liquid chromatography. The microorganisms that were isolated by the enrichment culture method were used to degrade the organic acids such as oxalic acid and acetic acid. Time courses of biological degradation of these organic acids indicated diauxic growth, which was found in a culture with mixed substrates. In the treatment of sodium lignosulfonate, the ozonolysis and microbial treatment using activated sludge converted sodium lignosulfonate into carbon dioxide and water almost completely.
G. Béchard, H. Yamazaki, W. Douglas Gould et al.
Journal of Environmental Quality · 1994
A mixed aerobic-anaerobic microbial treatment process was developed previously for acid mine drainage (AMD) using straw as a substrate. The process was effective only if AMD was supplemented with sucrose. The present study was conducted to determine which, if any, of three cellulosic materials could sustain the microbial treatment of AMD without the addition of a sucrose amendment and to determine the effect of the retention time on the performance of the reactorsThe performance of small reactors that treated simulated AMD in the continuous mode was evaluated using alfalfa (Medicaga sativa L.) hay, timothy (Phleum pratense L.) hay, and straw with a 5-d retention time
Julie Woodfield, A. Argent
Journal of Tropical Pediatrics · 2008
The World Health Organization (WHO) has produced guidelines for the management of common illnesses in hospitals with limited resources. This series reviews the scientific evidence behind WHO’s recommendations. The WHO guidelines, and more reviews are available at http://www.ichrc.org This review addresses the question: What is the most appropriate anti-microbial treatment for tuberculous meningitis? The WHO Pocketbook of Hospital Care for Children recommends as the optimal treatment regimen, where there is no drug resistance:
P. Basso, N. Câmara, Helioswilton Sales-Campos
Frontiers in Pharmacology · 2019
Inflammatory bowel disease (IBD) is a group of multifactorial and inflammatory infirmities comprised of two main entities: Ulcerative colitis (UC) and Crohn’s disease (CD). Classic strategies to treat IBD are focused on decreasing inflammation besides inducing and extending disease remission. However, these approaches have several limitations such as low responsiveness, excessive immunosuppression, and refractoriness. Despite the multifactorial causality of IBD, immune disturbances and intestinal dysbiosis have been suggested as the central players in disease pathogenesis. Hence, therapies aiming at modulating intestinal microbial composition may represent a promising strategy in IBD control. Fecal microbiota transplantation (FMT) and probiotics have been explored as promising candidates to reestablish microbial balance in several immune-mediated diseases such as IBD. These microbial-based therapies have demonstrated the ability to reduce both the dysbiotic environment and production of inflammatory mediators, thus inducing remission, especially in UC. Despite these promising results, there is still no consensus on the relevance of such treatments in IBD as a potential clinical strategy. Thus, this review aims to critically review and describe the use of FMT and probiotics to treat patients with IBD.
Guangxue Wu, Qidong Yin
npj Clean Water · 2020
Biological wastewater treatment has developed for more than 100 years, and new concepts about future wastewater treatment have been put forward worldwide. Environmental biotechnology is still the key contributor for wastewater management. However, these biotechnologies are facing challenges due to stringent discharging standards and the removal of emerging pollutants. Here, a new concept of microbial niche nexus sustaining biological wastewater treatment was proposed, which can achieve the efficient removal of known and unknown pollutants through tuning microbial niches to accommodate diverse microbial communities. Microbial niche nexus could be applied to solve emerging challenges besides infrastructure construction. In addition, the co-enrichment of r/K-strategists and the establishment of microenvironments with substrate gradients could be adopted for the design and operation of biological wastewater treatment processes. Finally, future development and perspectives were presented through aspects of microbial enrichment, microbial function and metabolism identification, system design and operation control, and new technology development and application.
Peng Song, Xue Zhang, Shuhua Wang et al.
Frontiers in Microbiology · 2023
Proteases (proteinases or peptidases) are a class of hydrolases that cleave peptide chains in proteins. Endopeptidases are a type of protease that hydrolyze the internal peptide bonds of proteins, forming shorter peptides; exopeptidases hydrolyze the terminal peptide bonds from the C-terminal or N-terminal, forming free amino acids. Microbial proteases are a popular instrument in many industrial applications. In this review, the classification, detection, identification, and sources of microbial proteases are systematically introduced, as well as their applications in food, detergents, waste treatment, and biotechnology processes in the industry fields. In addition, recent studies on techniques used to express heterologous microbial proteases are summarized to describe the process of studying proteases. Finally, future developmental trends for microbial proteases are discussed.
Huiru Li, Shaohua Wu, Cheng Du et al.
International Journal of Environmental Research and Public Health · 2020
In recent years, close attention has been paid to microbial flocculants because of their advantages, including safety to humans, environmental friendliness, and acceptable removal performances. In this review, the preparation methods of microbial flocculants were first reviewed. Then, the performances of bioflocculants in the removal of suspended solids, heavy metals, and other organic pollutants from various types of wastewater were described and commented, and the removal mechanisms, including adsorption bridging, charge neutralization, chemical reactions, and charge neutrality, were also discussed. The future research needs on microbial flocculants were also proposed. This review would lead to a better understanding of current status, challenges, and corresponding strategies on microbial flocculants and bioflocculation in wastewater treatment.
E. Masters, B. Ricciardi, K. Bentley et al.
Nature Reviews Microbiology · 2022
Osteomyelitis remains one of the greatest risks in orthopaedic surgery. Although many organisms are linked to skeletal infections, Staphylococcus aureus remains the most prevalent and devastating causative pathogen. Important discoveries have uncovered novel mechanisms of S. aureus pathogenesis and persistence within bone tissue, including implant-associated biofilms, abscesses and invasion of the osteocyte lacuno-canalicular network. However, little clinical progress has been made in the prevention and eradication of skeletal infection as treatment algorithms and outcomes have only incrementally changed over the past half century. In this Review, we discuss the mechanisms of persistence and immune evasion in S. aureus infection of the skeletal system as well as features of other osteomyelitis-causing pathogens in implant-associated and native bone infections. We also describe how the host fails to eradicate bacterial bone infections, and how this new information may lead to the development of novel interventions. Finally, we discuss the clinical management of skeletal infection, including osteomyelitis classification and strategies to treat skeletal infections with emerging technologies that could translate to the clinic in the future. Osteomyelitis is an infection of bone that arises when a pathogen colonizes bone tissue owing to injury or surgery. In this Review, Masters and colleagues explore the microbial pathogenesis, immunity and clinical management of bone infections.
Yongkui Yang, Longfei Wang, Feng Xiang et al.
International Journal of Environmental Research and Public Health · 2020
Controlling wastewater pollution from centralized industrial zones is important for reducing overall water pollution. Microbial community structure and diversity can adversely affect wastewater treatment plant (WWTP) performance and stability. Therefore, we studied microbial structure, diversity, and metabolic functions in WWTPs that treat industrial or municipal wastewater. Sludge microbial community diversity and richness were the lowest for the industrial WWTPs, indicating that industrial influents inhibited bacterial growth. The sludge of industrial WWTP had low Nitrospira populations, indicating that influent composition affected nitrification and denitrification. The sludge of industrial WWTPs had high metabolic functions associated with xenobiotic and amino acid metabolism. Furthermore, bacterial richness was positively correlated with conventional pollutants (e.g., carbon, nitrogen, and phosphorus), but negatively correlated with total dissolved solids. This study was expected to provide a more comprehensive understanding of activated sludge microbial communities in full-scale industrial and municipal WWTPs.
Z. Aghalari, H. Dahms, M. Sillanpää et al.
Globalization and Health · 2020
Background Due to unrestricted entry of wastewater into the environment and the transportation of microbial contaminants to humans and organisms, environmental protection requires the use of appropriate purification systems with high removal efficiency for microbial agents are needed. The purpose of this study was to determine the efficacy of current wastewater treatment systems in removing microbes and their contaminants. Methods A systematic review was conducted for all articles published in 5 Iranian environmental health journals in 11 years. The data were collected according to the inclusion and exclusion criteria and by searching the relevant keywords in the articles published during the years (2008–2018), with emphasis on the efficacy of wastewater treatment systems in removing microbial agents. Qualitative data were collected using a preferred reporting items for systematic reviews and meta-analyzes (PRISMA) standard checklist. After confirming the quality of the articles, information such as the name of the first author and the year of publication of the research, the type of study, the number of samples, the type of purification, the type of microbial agents and the rate of removal of microbial agents were entered into the checklist. Also the removal rates of the microbial agents mentioned in the studies were compared with united states environmental protection agency (US-EPA) standards. Results In this study, 1468 articles retrieved from 118 issues of 5 environmental health journals were reviewed. After reviewing the quality of the articles in accordance with the research objectives, 14 articles were included in the study that were published between 2010 and 2018. In most studies, two main indicators Total coliforms and Fecal coliforms in wastewater were investigated. Removing fungi and viral contamination from wastewater was not found in any of the 14 studies. Different systems (activated sludge, stabilization ponds, wetlands, and low and medium pressure UV disinfection systems were used to remove microbial agents in these studies. Most articles used active sludge systems to remove Total coliforms and Fecal coliforms , which in some cases were not within the US-EPA standard. The removal of Cysts and Parasitic eggs was only reporte from stabilization pond systems (SPS) where removal efficiency was found in accordance with US-EPA standards. Conclusions Different types of activated sludge systems have higher efficacy to remove microbial agents and are more effective than other mentioned systems in removing the main indicators of sewage contamination including Total coliforms and Fecal coliforms . However, inappropriate operation, maintenance and inadequate handling of activated sludge can also reduce its efficiency and reduce the removal of microbial agents, which was reported in some studies. Therefore, it is recommended to conduct research on how to improve the operation, maintenance, and proper management of activated sludge systems to transfer knowledge to users of sludge systems and prevent further health issues related to microbial agents.
Kayla Jaye, C. G. Li, D. Chang et al.
Gut Microbes · 2022
ABSTRACT In recent years, the role of gut microbial metabolites on the inhibition and progression of cancer has gained significant interest in anticancer research. It has been established that the gut microbiome plays a pivotal role in the development, treatment and prognosis of different cancer types which is often mediated through the gut microbial metabolites. For instance, gut microbial metabolites including bacteriocins, short-chain fatty acids and phenylpropanoid-derived metabolites have displayed direct and indirect anticancer activities through different molecular mechanisms. Despite the reported anticancer activity, some gut microbial metabolites including secondary bile acids have exhibited pro-carcinogenic properties. This review draws a critical summary and assessment of the current studies demonstrating the carcinogenic and anticancer activity of gut microbial metabolites and emphasises the need to further investigate the interactions of these metabolites with the immune system as well as the tumour microenvironment in molecular mechanistic and clinical studies. Graphical abstract
C. Kan, Y. Lam
Materials · 2013
Cotton fabrics are highly popular because of their excellent properties such as regeneration, bio-degradation, softness, affinity to skin and hygroscopic properties. When in contact with the human body, cotton fabrics offer an ideal environment for microbial growth due to their ability to retain oxygen, moisture and warmth, as well as nutrients from spillages and body sweat. Therefore, an anti-microbial coating formulation (Microfresh and Microban together with zinc oxide as catalyst) was developed for cotton fabrics to improve treatment effectiveness. In addition, plasma technology was employed in the study which roughened the surface of the materials, improving the loading of zinc oxides on the surface. In this study, the low stress mechanical properties of plasma pre-treated and/or anti-microbial-treated cotton fabric were studied. The overall results show that the specimens had improved bending properties when zinc oxides were added in the anti-microbial coating recipe. Also, without plasma pre-treatment, anti-microbial-treatment of cotton fabric had a positive effect only on tensile resilience, shear stress at 0.5° and compressional energy, while plasma-treated specimens had better overall tensile properties even after anti-microbial treatment.
Satish Sharma, James Mohler, S. Mahajan et al.
Microorganisms · 2023
Biofilm is complex and consists of bacterial colonies that reside in an exopolysaccharide matrix that attaches to foreign surfaces in a living organism. Biofilm frequently leads to nosocomial, chronic infections in clinical settings. Since the bacteria in the biofilm have developed antibiotic resistance, using antibiotics alone to treat infections brought on by biofilm is ineffective. This review provides a succinct summary of the theories behind the composition of, formation of, and drug-resistant infections attributed to biofilm and cutting-edge curative approaches to counteract and treat biofilm. The high frequency of medical device-induced infections due to biofilm warrants the application of innovative technologies to manage the complexities presented by biofilm.
C. Desai, Kunal R. Jain, R. Boopathy et al.
Frontiers in Microbiology · 2021
Citation: Desai C, Jain KR, Boopathy R, van Hullebusch ED and Madamwar D (2021) Editorial: Eco-Sustainable Bioremediation of Textile Dye Wastewaters: Innovative Microbial Treatment Technologies and Mechanistic Insights of Textile Dye Biodegradation. Front. Microbiol. 12:707083. doi: 10.3389/fmicb.2021.707083 Editorial: Eco-Sustainable Bioremediation of Textile Dye Wastewaters: Innovative Microbial Treatment Technologies and Mechanistic Insights of Textile Dye Biodegradation
Andrew Hodgkiss
Oxford Medicine Online · 2016
As long-term cancer survival becomes a widely shared experience, the quality of life of people living with and beyond a cancer diagnosis is increasingly important. Optimizing the prevention and treatment of any psychiatric consequences of certain tumours and treatments is now central to high-quality cancer care. This book—a rather original addition to the oncology and psycho-oncology literature—aims to equip oncology clinicians with the knowledge to more expertly prevent, detect, and manage the ‘organic’ psychiatric disorders experienced by people with cancer. It will also serve as a valuable introduction to contemporary oncology for psychiatrists. The psychiatry of cancer is a distinct subject within the wider field of psycho-oncology. Psychiatric disorders arising through direct biological mechanisms from particular tumours or cancer treatments is a narrower topic still, but one in which oncologists are required to have expertise. This book considers in detail the psychiatric aspects of pro-inflammatory cytokines, endocrine paraneoplastic syndromes, onconeuronal antibodies, brain irradiation, hormone deprivation, glucocorticoid treatment, conventional chemotherapies, and molecularly targeted agents.
, Serhii Protsenko, Mykola Kizyeyev et al.
Environmental Problems · 2021
The possibility of increasing the efficiency of municipal wastewater treatment plant (WWTP) operation by changing the flow diagram of biological wastewater treatment in aeration tanks at minimum expenses for their reconstruction is shown in the paper on the example of one of the regional centres of Ukraine. The technology of nitri-denitrification of wastewater according to the flow diagram of the two-stage modified Ludzak-Ettinger process is offered for the considered conditions. The distribution of wastewater flows and internal nitrate recycling between the individual stages of this flow diagram has been optimized in order to minimize the residual content of total nitrogen in the treated effluents. Computer dynamic modelling of biochemical processes has proved the high efficiency and reliability of the flow diagram proposed by the authors.
Adewale Ajao
Preprints.org · 2024
Researchers are increasingly concerned about microplastics (MPs) since they have proven to be detrimental to the environment and humans. They not only contribute to the accumulation of plastics in the environment, but they can also help spread micropollutants through absorption. MPs have entered the environment through a variety of channels, including direct discharge through human activities, the textile industry, and wastewater treatment systems. Wastewater treatment plants (WWTPs) are seen as the final line of defense, forming a barrier between MPs and the environment. The most common MPs found in wastewater are polyethylene terephthalate (PET), polyethylene (PE), polypropylene (PP), and polystyrene. The purpose of this study is to investigate and measure the efficacy of conventional and advanced technologies in removing microplastic. The fate of MPs in WWTPs and their impact on various wastewater treatment processes will be thoroughly examined. Both conventional and advanced methods of treatment will be discussed. Conventional methods include coagulation/flocculation, sedimentation, and filtration. Advanced treatment methods that will be discussed include membrane bioreactors, rapid sand filtration, electrocoagulation, and photocatalytic degradation. Despite the high removal of MPs, WWTPs remain an important entry point into aquatic and terrestrial systems due to the large volumes involved and the quantity of sludge reused through land application. Also, the complex interactions between MPs and other environmental pollutants may broaden MPs' effects on wastewater treatment processes, which have yet to be fully researched. Furthermore, potential issues with MP removal from treatment procedures and microplastic remediation techniques in drinking water was discussed.
Archis R. Ambulkar
Oxford Research Encyclopedia of Environmental Science · 2017
Since the industrial revolution, societies across the globe have observed significant urbanization and population growth. Newer technologies, industries, and manufacturing plants have evolved over the period to develop sophisticated infrastructures and amenities for mankind. To achieve this, communities have utilized and exploited natural resources, resulting in sustained environmental degradation and pollution. Among various adverse ecological effects, nutrient contamination in water is posing serious problems for the water bodies worldwide. Nitrogen and phosphorus are the basic constituents for the growth and reproduction of living organisms and occur naturally in the soil, air, and water. However, human activities are affecting their natural cycles and causing excessive dumping into the surface and groundwater systems. Higher concentrations of nitrogen and phosphorus-based nutrients in water resources lead to eutrophication, reduction in sunlight, lower dissolved oxygen levels, changing rates of plant growth, reproduction patterns, and overall deterioration of water quality. Economically, this pollution can impact the fishing industry, recreational businesses, property values, and tourism. Also, using nutrient-polluted lakes or rivers as potable water sources may result in excess nitrates in drinking water, production of disinfection by-products, and associated health effects. Nutrients contamination in water commonly originates from point and non-point sources. Point sources are the specific discharge locations, like wastewater treatment plants (WWTP), industries, and municipal waste systems; whereas, non-point sources are discrete dischargers, like agricultural lands and storm water runoffs. Compared to non-point sources, point sources are easier to identify, regulate, and treat. WWTPs receive sewage from domestic, business, and industrial settings. With growing pollution concerns, nutrients removal and recovery at treatment plants is gaining significant attention. Newer chemical and biological nutrient removal processes are emerging to treat wastewater. Nitrogen removal mainly involves nitrification-denitrification processes; whereas, phosphorus removal includes biological uptake, chemical precipitation, or filtration. In regards to non-point sources, authorities are encouraging best management practices to control pollution loads to waterways. Governments are opting for novel strategies like source nutrient reduction schemes, bioremediation processes, stringent effluent limits, and nutrient trading programs. Source nutrient reduction strategies such as discouraging or banning use of phosphorus-rich detergents and selective chemicals, industrial pretreatment programs, and stormwater management programs can be effective by reducing nutrient loads to WWTPs. Bioremediation techniques such as riparian areas, natural and constructed wetlands, and treatment ponds can capture nutrients from agricultural lands or sewage treatment plant effluents. Nutrient trading programs allow purchase/sale of equivalent environmental credits between point and non-point nutrient dischargers to manage overall nutrient discharges in watersheds at lower costs. Nutrient pollution impacts are quite evident and documented in many parts of the world. Governments and environmental organizations are undertaking several waterways remediation projects to improve water quality and restore aquatic ecosystems. Shrinking freshwater reserves and rising water demands are compelling communities to make efficient use of the available water resources. With smarter choices and useful strategies, nutrient pollution in the water can be contained to a reasonable extent. As responsible members of the community, it is important for us to understand this key environmental issue as well as to learn the current and future needs to alleviate this problem.