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Abstract

We demonstrate here that microbial profiling can elucidate stress signals that cannot be observed even through interrogation of host transcriptome, leading to an alternate mechanism for evaluating in situ conditions experienced by host organisms. This study is a proof-of-concept for the use of microbial communities as microsensors, with great potential for interrogation of a wide range of host systems. Video Abstract.

Keywords

MetagenomicsTranscriptomeMicrobiomeMicrobial ecologyGeneGene expression profiling

Identifiers

PubMed
32438915
Journal
Microbiome
Year
2020